Open Daily: 10am - 10pm | Alley door pickup 10am - 7pm 3038 Hennepin Ave Minneapolis, MN
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  • Open Daily: 10am - 10pm
    Alley-side Pickup: 10am - 7pm

    3038 Hennepin Ave Minneapolis, MN
    612-822-4611

Open Daily: 10am - 10pm | Alley-side Pickup: 10am - 7pm
3038 Hennepin Ave Minneapolis, MN
612-822-4611
Bioimage Data Analysis Workflows ‒ Advanced Components and Methods

Bioimage Data Analysis Workflows ‒ Advanced Components and Methods

Miura, Kota
Sladoje, Natasa

Paperback

Series: Learning Materials in Biosciences

Anatomy & PhysiologyBiologyChemistry

ISBN10: 3030763935
ISBN13: 9783030763930
Publisher: Springer Nature
Published: Sep 30 2022
Pages: 212
Weight: 0.80
Height: 0.47 Width: 6.69 Depth: 9.61
Language: English

This open access textbook aims at providing detailed explanations on how to design and construct image analysis workflows to successfully conduct bioimage analysis.

Addressing the main challenges in image data analysis, where acquisition by powerful imaging devices results in very large amounts of collected image data, the book discusses techniques relying on batch and GPU programming, as well as on powerful deep learning-based algorithms. In addition, downstream data processing techniques are introduced, such as Python libraries for data organization, plotting, and visualizations. Finally, by studying the way individual unique ideas are implemented in the workflows, readers are carefully guided through how the parameters driving biological systems are revealed by analyzing image data. These studies include segmentation of plant tissue epidermis, analysis of the spatial pattern of the eye development in fruit flies, and the analysis of collective cell migration dynamics.

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